Browsing by Author "Haramoto, E"
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Publication Detection of coliform bacteria in irrigation water and on vegetable surfaces in the Kathmandu Valley of Nepal(Institute of Medicine, 2016) Shrestha, S; Haramoto, E; Sherchan, JB; Junko, SAbstract Introduction: Consumption of vegetables irrigated using polluted water is widespread in the Kathmandu Valley of Nepal. However, studies on the microbial analysis of water and vegetable samples from this region are limited. In this study, irrigation water and vegetable samples from farmers' fields in the Kathmandu Valley were examined for the presence of Escherichia coli and total coliforms. Methods: Irrigation water (n = 8) and vegetable (n = 27) samples were collected from November to December 2015. The presence of E. coli and total coliforms in water and on vegetable surfaces was determined by the most probable number (MPN) method using Colilert reagent. In addition, information about vegetable washing and consumption was obtained through a survey to discuss changes in their microbial concentrations before selling and/or consumption. Results: E. coli was detected in 75% (6/8) of the water samples, with concentrations ranging from 8.8 * 10 ^ 3 to 5.2×107 MPN/100 ml, whereas total coliforms were detected in all the 8 water samples, with concentrations ranging from 9.7 * 10 ^ 2 | 7.9 * 10 ^ 7 * MPN / 100 * m . E. coli was similarly detected in 7% (2/27) of the vegetable samples, with concentrations ranging from 0.4 to 10.2 MPN/cm², whereas total coliforms were detected in 59% (16/27) of the vegetable samples, with concentrations ranging from 0.4 to 448 MPN/cm². Well, river, and tap were the predominant sources of water for washing vegetables before selling and/or consumption. Conclusions: Unlike water samples, vegetable samples contained low microbial contamination; however, the level of contaminants was expected to increase because of washing with polluted water. Keywords: E. coli, Kathmandu, total coliforms, vegetable contaminationPublication Detection of Cryptosporidium, Giardia, fecal Indicator bacteria, and total bacteria in commercial jar water in the Kathmandu Valley, Nepal(Institute of Medicine, 2015) Malla, B; Ghaju, Shrestha R; Bhandari, D; Tandukar, S; Shrestha, S; Yoshinaga, H; Inoue, D; Sei, K; Nishida, K; Tanaka, Y; Sherchand, JB; Haramoto, EAbstract Introduction: Jar water is a convenient and common source of drinking water in the Kathmandu Valley. However, studies including detailed microbial analyses of this source of potable water are lacking. In this study, jar water samples were examined for the occurrence of Cryptosporidium, Giardia, fecal indicator bacteria, and total bacteria. Methods: Thirty different brands of jars were collected in September 2014. Escherichia coli and total coliforms were determined using a Colilert reagent. Ten of the 30 brands were selected to test for Cryptosporidium, Giardia, and total bacteria. Bacterial DNA extraction from water samples was performed using the Cica Geneus DNA Extraction Kit, followed by quantitative polymerase chain reaction (qPCR) targeting the 16S rRNA gene of bacterial DNA. Protozoan detection was accomplished by concentrating the samples using the electronegative membrane vortex method. followed by immunomagnetic separation and fluorescent staining. Results: E. coli was detected in 10% of the samples, with a maximum concentration of 2 most probable number (MPN)/100 ml., whereas total coliforms were detected in 97% of the samples, with a maximum and mean concentration of 7.3 x 102 and 3.8 x 10 MPN/100 ml., respectively. Total coliforms concentrations in 40% of the samples ranged from 10 to 10 MPN/100 ml. Cryptosporidium and Giardia were not detected in any of the tested samples. Concentrations of total bacteria in the samples ranged from 10 to 10 cells/100 ml. Conclusions: Ninety-seven percent of the jar water brands were unsuitable for drinking without proper treatment based on the guideline values of the National Drinking Water Quality Standards (NDWQS) of Nepal. There is no guideline value for total bacteria in NDWQS however, high concentrations can be indicative of poor control on regrowth of bacteria and recontamination or inefficient water treatment methods. Keywords: Cryptosporidium, Giardia, Jar water, qPCR, Total bacteria